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SpotNet
SpotNet is a training dataset for a deep learning model for spot detection published in Laubscher et al. 2023.
This dataset is licensed under a modified Apache license for non-commercial academic use only.
The dataset can be accessed using deepcell.datasets with a DeepCell API key.
For more information about using a DeepCell API key, please see DeepCell API Key.
Each batch of the dataset contains two components:
X: raw images of fluorescent spots
y: coordinate annotations for spot locations
from deepcell.datasets import SpotNet
spotnet = SpotNet(version='1.0')
X_val, y_val = spotnet.load_data(split='val')